Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCAGGCGGAGGGGGCTTTGCTGGTC
.(((((((((((((((((((((&))))))...)))))))))....)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001350235
GeneSymbolPIK3CD
Binding site54,83
Score0.846
Seed1
Au0.485
Energy-22.9
Binding len29
Me-3.793
Phylopstem1.205998067857143
Phylopflank1.08317175625
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end8
Position5UTR
2D Structure