Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGAGTGTGTGCATGTCACCGAGGAGGAGCAGCTGCAGCTGCGGG
((((((((((((((((.....&.)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001350235
GeneSymbolPIK3CD
Binding site1542,1587
Score1.0
Seed1
Au0.324
Energy-28.4
Binding len18
Me-3.938
Phylopstem3.7961494875
Phylopflank4.745397420000001
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure