Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGTGGTAACATTGCAGCCCTAAGCAGCATGTG
..((((((((((((((((.((&.)).))))))))....))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181794
GeneSymbolPKIB
Binding site781,815
Score0.923
Seed1
Au0.603
Energy-20.2
Binding len26
Me-4.957
Phylopstem2.786889466666667
Phylopflank2.0029541875000003
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure