Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGAGGCTGTGGCTGCAGG
((((((((((((((.......&.)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181839
GeneSymbolPKIA
Binding site536,556
Score0.846
Seed1
Au0.529
Energy-20.7
Binding len16
Me-4.906
Phylopstem1.0301884
Phylopflank0.881004860225
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end1
Position3UTR
2D Structure