Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAACTGCAGAGCTGTAAG
(((((((((((((((......&))))))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181839
GeneSymbolPKIA
Binding site2996,3014
Score1.0
Seed1
Au0.588
Energy-19.7
Binding len18
Me-4.171
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end2
Position3UTR
2D Structure