Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACATATCGTGTGCCAGA
..(((((((((.((((......&))))...))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_181846
GeneSymbolZSCAN22
Binding site3979,3996
Score0.923
Seed1
Au0.412
Energy-17.6
Binding len17
Me-8.304
Phylopstem0.32650434888888896
Phylopflank-0.0023637769999999975
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure