Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCAGCCGCAGCA
.....((((((((((.(((((&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181846
GeneSymbolZSCAN22
Binding site1249,1265
Score1.0
Seed0
Au0.426
Energy-25.9
Binding len16
Me-13.899
Phylopstem-1.5046753
Phylopflank1.20933578
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure