Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTGGCTGCTGCGTCCAGGGCTGCTGCTGCCGCCGCGGCTGCT
..(((((((((((.(((.(((&.)))..))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181847
GeneSymbolAMIGO2
Binding site278,322
Score1.0
Seed1
Au0.353
Energy-27.2
Binding len22
Me-5.814
Phylopstem0.12975185454545454
Phylopflank-0.40922715749999994
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure