Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTTCTCACTGTAGCTGCT
..(((((((((((...((((.&)))).....))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181861
GeneSymbolAPAF1
Binding site5563,5584
Score1.0
Seed1
Au0.529
Energy-22.0
Binding len21
Me-6.782
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure