Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAAGCTGGAGCGCATGGAGACCAAGTGG
(((((((((((((((((((...&)))))))))...........)))).))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_181865
GeneSymbolACOT7
Binding site557,590
Score1.0
Seed1
Au0.412
Energy-24.5
Binding len33
Me-3.938
Phylopstem0.9998406062499998
Phylopflank1.4958728175000005
Longest consecutive pairings9
Position of longest consecutive pairings24
Pairings in 3prime end5
PositionCDS
2D Structure