Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATGAAGCTCATGGATGAGGTCGCCGGGATCGTGGCTGCAC
.(((((((((((((....(((&.)))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181865
GeneSymbolACOT7
Binding site719,762
Score1.0
Seed1
Au0.412
Energy-23.8
Binding len20
Me-4.762
Phylopstem2.3091514615384616
Phylopflank2.9787707675000004
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure