Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCACGACCGCAATGCAAG
(((((..((((((((((((((&))))).))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181876
GeneSymbolPPP2R2C
Binding site1422,1444
Score0.962
Seed0
Au0.471
Energy-25.9
Binding len22
Me-7.382
Phylopstem2.8673624
Phylopflank4.507037455
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end8
Position3UTR
2D Structure