Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTTCAGCCGCAGCTC
....(((((((((((.(((.(&).)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181877
GeneSymbolZSCAN2
Binding site1510,1527
Score0.923
Seed0
Au0.397
Energy-22.5
Binding len17
Me-9.78
Phylopstem-0.29128546636363634
Phylopflank-0.266513597375
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure