Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCCACGCCACCCCACCCACCCCGGATCGCGGCTGTC
..(((((((((((((((((((&))))))).....................)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181887
GeneSymbolUBE2D3
Binding site220,261
Score0.846
Seed1
Au0.368
Energy-22.4
Binding len41
Me-4.957
Phylopstem2.3632691999999995
Phylopflank0.8494210374999998
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end8
Position5UTR
2D Structure