Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCCACCTAGAAGGGGCCTCAGCAGCCGTGCAAC
(((((((((((((.(((((((&))))))).)))..............)))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_181900
GeneSymbolSTARD5
Binding site1705,1743
Score0.846
Seed1
Au0.441
Energy-22.9
Binding len38
Me-4.794
Phylopstem5.0683169310344836
Phylopflank4.5737663275
Longest consecutive pairings7
Position of longest consecutive pairings31
Pairings in 3prime end7
Position3UTR
2D Structure