Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTACAAAAAGCTGTGAA
((((((((....(((((((..&)))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182495
GeneSymbolNXPE2
Binding site1173,1191
Score0.846
Seed1
Au0.662
Energy-17.4
Binding len18
Me-12.408
Phylopstem-0.02770465
Phylopflank0.05893782374999999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure