Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCTAGAAAGGAGATGGGGCTTCAACCAGG
..((((((((((((((((....&))))))))))))............)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_182497
GeneSymbolKRT40
Binding site1498,1527
Score0.846
Seed1
Au0.456
Energy-23.1
Binding len29
Me-4.957
Phylopstem1.2450855892857142
Phylopflank1.1819987324999999
Longest consecutive pairings12
Position of longest consecutive pairings17
Pairings in 3prime end4
Position3UTR
2D Structure