Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAACTGTCCAGCGCGGAGCAGCTGCAGG
((((((((((((((((.....&))))))............)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182497
GeneSymbolKRT40
Binding site1030,1059
Score0.923
Seed1
Au0.441
Energy-21.9
Binding len29
Me-3.938
Phylopstem0.9342577071428568
Phylopflank0.6070523475
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure