Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTATTCAGGAGGCTGAGGTGGGAGGATTGCTTGAGCCCAGC
..(((((((((((((((((((.&))))))))))))....................))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_182502
GeneSymbolTMPRSS11B
Binding site1757,1798
Score0.923
Seed1
Au0.456
Energy-20.5
Binding len41
Me-4.957
Phylopstem0.41903152499999996
Phylopflank0.87728191375
Longest consecutive pairings12
Position of longest consecutive pairings29
Pairings in 3prime end7
Position3UTR
2D Structure