Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAACCATAGAAGAAGCTGCAGA
((((((((....((.((.(((&.))).)).))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182505
GeneSymbolC9orf85
Binding site470,492
Score0.846
Seed1
Au0.676
Energy-16.4
Binding len21
Me-13.143
Phylopstem1.2074019
Phylopflank0.6792596300000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure