Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCAGAGCAGCCGCAGCG
.....(((((((((((.((((&)))).....))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182507
GeneSymbolKRT80
Binding site983,1004
Score0.846
Seed0
Au0.353
Energy-23.3
Binding len21
Me-13.666
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure