Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGCAGACCCGCTACATTCACAGCCTTCAGCACCAACAGCTGCT
..(((((((.(((((.(((((&.))))))))).)...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182508
GeneSymbolFAM216B
Binding site260,307
Score0.808
Seed1
Au0.485
Energy-21.9
Binding len23
Me-6.433
Phylopstem5.5257928285714275
Phylopflank4.6153997725
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end7
PositionCDS
2D Structure