Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACTTACAATTCTAAGCTGCAT
.(((((((..(((((((((((&)))..))))))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182508
GeneSymbolFAM216B
Binding site2114,2138
Score0.923
Seed1
Au0.588
Energy-19.8
Binding len24
Me-6.092
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end8
Position3UTR
2D Structure