Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCGGGGAGGGGGTACCCAGG
..(((((((((((((.(((...&))).)))))))))...)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_182517
GeneSymbolC1orf210
Binding site57,78
Score0.846
Seed1
Au0.294
Energy-23.7
Binding len21
Me-5.19
Phylopstem-0.20563550000000003
Phylopflank-0.209340725
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end4
Position5UTR
2D Structure