Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAAAGGGCCCTGATTAAGGGGATGGATTGCACACTGTAGTGA
(((((((.(((((((((((...&))))))))))))))............................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_182520
GeneSymbolC22orf15
Binding site742,789
Score0.821
Seed1
Au0.456
Energy-26.2
Binding len47
Me-6.251
Phylopstem2.3597566363636364
Phylopflank2.085641771875
Longest consecutive pairings14
Position of longest consecutive pairings33
Pairings in 3prime end5
PositionCDS
2D Structure