Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGCGCGCCGCCCTGGACGGGGCGCACCGACTGCGCGCGCGGCTGCGGG
(((((((((((..((((.(((&.)))...))))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182522
GeneSymbolTAFA4
Binding site9,59
Score0.846
Seed1
Au0.25
Energy-24.8
Binding len25
Me-8.574
Phylopstem0.15551640000000005
Phylopflank0.11795927999999997
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure