Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTATGCAGCCACATGAGAAATAGTTTTTGCTGCT
..(((((((.(((((((((((&)))).))))))).))...............))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182523
GeneSymbolCMC1
Binding site3393,3429
Score0.923
Seed1
Au0.588
Energy-21.2
Binding len36
Me-6.2
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings24
Pairings in 3prime end8
Position3UTR
2D Structure