Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTGCAACCAATACCTCCCCAGGGGCCTGCTGAGCTGCAGC
(((((((((((((((((((..&)))))))))...................))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182526
GeneSymbolTMEM229B
Binding site1265,1306
Score0.846
Seed1
Au0.338
Energy-22.5
Binding len41
Me-3.938
Phylopstem-0.2649090825
Phylopflank-0.6604421787500001
Longest consecutive pairings9
Position of longest consecutive pairings32
Pairings in 3prime end6
Position3UTR
2D Structure