Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TATAGCCACAGCTGCT
..(((((((.(((((((....&))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182539
GeneSymbolTCTE1
Binding site2948,2964
Score0.923
Seed1
Au0.574
Energy-23.1
Binding len16
Me-6.2
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end4
Position3UTR
2D Structure