Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGAAGAGAAAGAAGAGAGGCTGCGTTCCTTCTATCAAGGGG
...((((((((((((((((((&))))))).............))))))).............)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_182551
GeneSymbolLCLAT1
Binding site1139,1184
Score0.846
Seed0
Au0.588
Energy-27.3
Binding len45
Me-6.515
Phylopstem5.125504999999999
Phylopflank5.023826962499999
Longest consecutive pairings7
Position of longest consecutive pairings38
Pairings in 3prime end8
PositionCDS
2D Structure