Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCCTCTGCGGCGGCGGA
((((.(((((((..((((((.&))))))..))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182554
GeneSymbolC10orf53
Binding site17,38
Score0.923
Seed0
Au0.343
Energy-25.0
Binding len21
Me-10.203
Phylopstem0.6241764857142857
Phylopflank0.8646670283333335
Longest consecutive pairings7
Position of longest consecutive pairings6
Pairings in 3prime end6
Position5UTR
2D Structure