Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGGAGCTGCTGGCAGTGCAGGGGAGCCTCGAAGTGG
(((((((((((((((((((...&))))))))................)))))))....)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_182563
GeneSymbolBRICD5
Binding site507,547
Score0.923
Seed1
Au0.279
Energy-25.7
Binding len40
Me-3.938
Phylopstem0.8638663384615385
Phylopflank0.6793317287499999
Longest consecutive pairings8
Position of longest consecutive pairings32
Pairings in 3prime end5
PositionCDS
2D Structure