Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCGAACCCCAGGACTGGAGTTTCGGTGA
((((((((((.(((((((....&.)))))))..)))))..))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_182572
GeneSymbolZSCAN1
Binding site679,707
Score0.846
Seed1
Au0.412
Energy-24.2
Binding len23
Me-6.762
Phylopstem4.196917146666667
Phylopflank4.35602607375
Longest consecutive pairings7
Position of longest consecutive pairings15
Pairings in 3prime end4
PositionCDS
2D Structure