Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGACACCTGCTCCGAAGCCAAGCACGGGATGGGGCTTCCCAGGGTCTC
((((((((.(((((((((...&.))))..)))))...)))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_182572
GeneSymbolZSCAN1
Binding site1665,1713
Score0.872
Seed1
Au0.382
Energy-27.6
Binding len24
Me-4.994
Phylopstem-0.039728727272727256
Phylopflank0.04144385000000002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure