Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCAACAGAAGGGAGAGAAGCGGCCCCAAGTGC
((((((((((((((((.((((.&))))..))))))))))..........))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_182578
GeneSymbolTHEM5
Binding site43,77
Score0.923
Seed1
Au0.426
Energy-23.0
Binding len34
Me-3.938
Phylopstem-0.4176160740740742
Phylopflank-0.17858532256410262
Longest consecutive pairings10
Position of longest consecutive pairings18
Pairings in 3prime end6
Position5UTR
2D Structure