Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCTGCAGCTGA
...((((((((((...((((.&)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182580
GeneSymbolCYB561D1
Binding site1967,1982
Score0.923
Seed0
Au0.368
Energy-21.1
Binding len15
Me-8.34
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure