Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGGGCTTCAGCTGCAAG
(((((((((.((((.(.....&).)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182581
GeneSymbolSPATA46
Binding site686,703
Score1.0
Seed1
Au0.426
Energy-19.2
Binding len17
Me-5.916
Phylopstem3.9737153333333333
Phylopflank2.4739553987500003
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure