Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCCAGCTGCAGCC
.....((((((((((.((((.&)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182584
GeneSymbolC20orf203
Binding site93,109
Score0.846
Seed0
Au0.368
Energy-22.3
Binding len16
Me-13.899
Phylopstem-0.30143638999999994
Phylopflank-0.10978152374999997
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure