Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGACCCAGGAGTAGCTCCATGGTGGCAGCAGCTCCCTCACTAGTGA
(((((((((((.(((((((((.&)))))))))...)))))............................)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_182587
GeneSymbolUNC80
Binding site1372,1424
Score0.846
Seed1
Au0.456
Energy-26.6
Binding len52
Me-7.284
Phylopstem-0.09213633333333333
Phylopflank-0.278293174375
Longest consecutive pairings9
Position of longest consecutive pairings43
Pairings in 3prime end7
PositionCDS
2D Structure