Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGATTAAACTTCAGTTGCAAA
(((((((((.((((...(((.&))).....)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001350329
GeneSymbolSUPT3H
Binding site2054,2077
Score1.0
Seed1
Au0.706
Energy-19.1
Binding len23
Me-6.149
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure