Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACATGCATGCTGGT
..(((((((.(.(((((((...&)))))))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_182588
GeneSymbolRGPD4
Binding site990,1007
Score0.846
Seed1
Au0.574
Energy-15.8
Binding len17
Me-9.546
Phylopstem2.5930387142857145
Phylopflank3.6892667175000007
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end5
PositionCDS
2D Structure