Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACACATTTAAAACACCAGAAAAGGAGCCT
....(((((((((((((((...&.)).))))))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_182588
GeneSymbolRGPD4
Binding site5020,5051
Score0.962
Seed0
Au0.632
Energy-23.8
Binding len19
Me-9.547
Phylopstem5.903162882352942
Phylopflank5.8867980625000005
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end5
PositionCDS
2D Structure