Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGACATCTTCTACTTCCCCTTCGACCAGCAGAACTGCAC
.((((((((((((((.((((.&.))))))))).))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182589
GeneSymbolHTR3E
Binding site726,769
Score1.0
Seed1
Au0.485
Energy-23.3
Binding len23
Me-4.026
Phylopstem3.278597941176471
Phylopflank2.1386974975
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end6
PositionCDS
2D Structure