Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTCAGTGGAGCTGTGGTTGCAGT
((((((((((((((.((....&.)).)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182589
GeneSymbolHTR3E
Binding site1494,1518
Score0.923
Seed1
Au0.397
Energy-20.2
Binding len19
Me-4.673
Phylopstem1.9781575428571425
Phylopflank1.2256725549999996
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure