Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCTCAGGTGATTAGACTTTGACTCTATTTCCCCAGGGACAGTGA
(((((..(((((((((((((((&))))))))))..........................)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_182597
GeneSymbolLSMEM1
Binding site1228,1275
Score0.923
Seed0
Au0.471
Energy-20.5
Binding len47
Me-7.382
Phylopstem0.7958159004878049
Phylopflank1.5919162560000002
Longest consecutive pairings10
Position of longest consecutive pairings37
Pairings in 3prime end8
Position3UTR
2D Structure