Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTACACTGCTTGGCTA
....((((((((.((((((((&))))))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182597
GeneSymbolLSMEM1
Binding site134,153
Score0.846
Seed0
Au0.647
Energy-16.8
Binding len19
Me-10.836
Phylopstem0.525508
Phylopflank0.06953778875000002
Longest consecutive pairings12
Position of longest consecutive pairings7
Pairings in 3prime end8
Position5UTR
2D Structure