Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAACCACAGGTGTAT
.((((.(((.((((((.....&)))))).))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182606
GeneSymbolTMPRSS11A
Binding site1122,1138
Score1.0
Seed0
Au0.603
Energy-19.0
Binding len16
Me-6.937
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings10
Pairings in 3prime end3
PositionCDS
2D Structure