Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCTGGCTGCC
..(((((..(((((((.....&)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_182606
GeneSymbolTMPRSS11A
Binding site3056,3069
Score0.846
Seed0
Au0.632
Energy-16.3
Binding len13
Me-8.327
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure