Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACGTTGTTAGCCAGGA
.((((((..(((((((((((((&.)))))).)))))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_182607
GeneSymbolVSIG1
Binding site1721,1770
Score0.923
Seed1
Au0.529
Energy-21.4
Binding len24
Me-7.163
Phylopstem2.827714285714286
Phylopflank3.1803125000000003
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end8
Position3UTR
2D Structure