Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACCTGGGGCTGCT
..((((((.(((..(((((((&)))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001350335
GeneSymbolCFAP298
Binding site1744,1762
Score0.923
Seed1
Au0.353
Energy-24.1
Binding len18
Me-8.159
Phylopstem5.326084571428572
Phylopflank4.3392982675
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end7
Position3UTR
2D Structure